PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009590031.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 378aa    MW: 43107.4 Da    PI: 7.9368
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009590031.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.13.6e-53171441128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     + pGfrFhPtdeelv +yL++k+++k+l++ e ik++diyk++PwdLpk ++ +e+ewyfF++rd+ky++++r+nr+t +g+Wkatg+d++++s+
  XP_009590031.1  17 MLPGFRFHPTDEELVGFYLRRKIQHKTLSI-ELIKQLDIYKFDPWDLPKLATIGEREWYFFCPRDRKYRNSTRPNRVTGAGFWKATGTDRPIYSS 110
                     579***************************.89***************8888899***************************************9 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +++ +glkk+Lvfykgra kg+ktdW+mhe+rl
  XP_009590031.1 111 eGSKCIGLKKSLVFYKGRAAKGTKTDWMMHEFRL 144
                     56677***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.23E-5815175IPR003441NAC domain
PROSITE profilePS5100557.69417175IPR003441NAC domain
PfamPF023651.5E-2619144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MMEEKRNESE GKIDEMMLPG FRFHPTDEEL VGFYLRRKIQ HKTLSIELIK QLDIYKFDPW  60
DLPKLATIGE REWYFFCPRD RKYRNSTRPN RVTGAGFWKA TGTDRPIYSS EGSKCIGLKK  120
SLVFYKGRAA KGTKTDWMMH EFRLPSITDS STPKRFLDKN IPPNDSWAIC RIFKKANSNT  180
HRALSHSWVS PQISSNTTPY FQTSNHFTPN EMSFIAKSAS SAIQFSNDLQ NSSMASFSPI  240
DLPPYRTINP ITTSHRHPQQ ISISNHDSTT SYTLSNSCTN LNIDASSLLL NMSSSILGDY  300
NNFSITLPEN IEENQIQEAG NLVKELPNVN VDHMQEQWGN VRSVIGFPVN ADIDAWKSNL  360
LWDSSPCPSE MSTSYSTN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4dul_B3e-571917819168NAC domain-containing protein 19
4dul_A3e-571917819168NAC domain-containing protein 19
1ut7_B3e-571917819168NO APICAL MERISTEM PROTEIN
1ut7_A3e-571917819168NO APICAL MERISTEM PROTEIN
1ut4_B3e-571917819168NO APICAL MERISTEM PROTEIN
1ut4_A3e-571917819168NO APICAL MERISTEM PROTEIN
3swp_D4e-571917822171NAC domain-containing protein 19
3swp_C4e-571917822171NAC domain-containing protein 19
3swp_B4e-571917822171NAC domain-containing protein 19
3swp_A4e-571917822171NAC domain-containing protein 19
3swm_D4e-571917822171NAC domain-containing protein 19
3swm_C4e-571917822171NAC domain-containing protein 19
3swm_B4e-571917822171NAC domain-containing protein 19
3swm_A4e-571917822171NAC domain-containing protein 19
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009590031.10.0PREDICTED: protein FEZ-like
SwissprotQ9ZVH01e-109FEZ_ARATH; Protein FEZ
TrEMBLM1D3A91e-165M1D3A9_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000803071e-165(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22022262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.11e-108NAC family protein